Method List
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#add_to_dataset Exodb::Cell
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#add_to_sample Exodb::Variant
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#alt VCF::Variant
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#alt_attr VCF
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#alternate Exodb::Variant
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#apply_filter Exodb::Variant
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assembly Exodb
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assembly_map Exodb::Ensembl::REST
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#begin Exodb::GeneLocationField
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#can_translated? Exodb::Generef
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#cds_location Exodb::Isoform
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#cds_seq Exodb::Isoform
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#chrom VCF::Variant
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#chromosome Exodb::VarLocationField
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#chromosome Exodb::GeneLocationField
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#codon_at Exodb::Isoform
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connect Exodb
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#contig VCF
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convert Exodb::Mapping
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#convert Exodb::Mapping
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#convlocation= Exodb::VarLocationField
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#count_allele String
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create_admin Exodb
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create_rouser Exodb
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create_rwuser Exodb
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create_user Exodb
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current_database Exodb
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#dl_occurrent! Exodb::Generef
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#dl_seq! Exodb::GeneLocationField
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#dl_symbol! Exodb::Generef
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#effect_pred Exodb::Isoform
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#end Exodb::GeneLocationField
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#exon_location Exodb::Isoform
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expanding Exodb::Generef
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#fileformat VCF
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#filter VCF::Variant
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#filter_attr VCF
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#format_attr VCF
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#genomic2cds_pos Exodb::Isoform
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#genomic2prot_pos Exodb::Isoform
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get Exodb::Ensembl::REST
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#get_splice Exodb::GeneLocationField
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#get_xref Exodb::XrefsField
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guess_miriam Exodb::Utils
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#has_sequence? Exodb::Generef
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#has_splices? Exodb::Generef
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#id String
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#id VCF::Variant
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#info VCF::Variant
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#info_attr VCF
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#initialize VCF::Variant
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#initialize VCF
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#is_hgvs? String
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#is_loc? String
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#is_miriam? String
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#is_pileup_var? String
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load_assembly_mapping! Exodb::Mapping
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load_indel_from_csv Exodb::Utils
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load_sample_from_csv Exodb::Utils
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load_snv_from_csv Exodb::Utils
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load_splice_from_csv Exodb::Utils
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load_variant_from_merge Exodb::Utils
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#location= Exodb::GeneLocationField
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#location= Exodb::VarLocationField
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#location_str Exodb::GeneLocationField
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#location_str Exodb::VarLocationField
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#longest_splice Exodb::Generef
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#meta VCF
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#mrna_len Exodb::Isoform
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#mrna_seq Exodb::Isoform
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#namespace String
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noverbose Exodb
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#open VCF
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#parse VCF
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#parse! VCF::Variant
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#parse_hgvs String
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#parse_loc String
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#parse_locstr Exodb::VarLocationField
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#parse_pileup_var String
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#pos VCF::Variant
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#prot_len Exodb::Isoform
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#prot_seq Exodb::Isoform
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putst Exodb
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putstv Exodb
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#qual VCF::Variant
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#ref VCF::Variant
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#resolve String
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#sample_data VCF::Variant
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#sample_num VCF
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#samples VCF
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sequence_region Exodb::Ensembl::REST
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session Exodb
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sessionload! Exodb
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#splice_rel_location Exodb::Isoform
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#start Exodb::GeneLocationField
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#stop Exodb::GeneLocationField
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#str VCF::Variant
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#symbol Exodb::Generef
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#to_seq Exodb::GeneLocationField
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#translate! Exodb::Cell
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translate! Exodb::Cell
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upload_generef_from_gff3 Exodb::Utils
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#utr3location Exodb::Isoform
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#utr5location Exodb::Isoform
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#variant_num VCF
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#variants VCF
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vep_hgvs_get Exodb::Ensembl::REST
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vep_region_get Exodb::Ensembl::REST
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verbose Exodb
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#where_cover Exodb::GeneLocationField::ClassMethods
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#where_in Exodb::GeneLocationField::ClassMethods
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#where_intersect Exodb::GeneLocationField::ClassMethods
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#where_ups_cover Exodb::GeneLocationField::ClassMethods
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#where_xrefs Exodb::XrefsField::ClassMethods
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#whole_seq Exodb::GeneLocationField