Class: Bio::Ucsc::Mm9::ChainCanFam2

Inherits:
Object
  • Object
show all
Defined in:
lib/bio-ucsc/mm9/chaincanfam2.rb

Constant Summary collapse

KLASS = 
"ChainCanFam2"
KLASS_S = 
"chainCanFam2"

Class Method Summary collapse

Class Method Details

.find_all_by_interval(interval, opt = {:partial => true}) ⇒ Object 



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# File 'lib/bio-ucsc/mm9/chaincanfam2.rb', line 73

def self.find_all_by_interval(interval, opt = {:partial => true}); interval = Bio::Ucsc::Gi.wrap(interval)
  chrom = interval.chrom[0..0].upcase + interval.chrom[1..-1]
  chr_klass = self.const_get("#{chrom}_#{KLASS}")
  chr_klass.__send__(:find_all_by_interval, interval, opt)
end

.find_by_interval(interval, opt = {:partial => true}) ⇒ Object

each chromosome



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# File 'lib/bio-ucsc/mm9/chaincanfam2.rb', line 67

def self.find_by_interval(interval, opt = {:partial => true}); interval = Bio::Ucsc::Gi.wrap(interval)
  chrom = interval.chrom[0..0].upcase + interval.chrom[1..-1]
  chr_klass = self.const_get("#{chrom}_#{KLASS}")
  chr_klass.__send__(:find_by_interval, interval, opt)
end