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[] Genomer::Plugin
#annotation_file Genomer::Plugin
#annotations Genomer::Plugin
annotations_gff Genomer::Files
#arguments Genomer::Runtime
#arguments Genomer::Plugin
#command Genomer::Runtime
#execute! Genomer::Runtime
fetch Genomer::Plugin
#flags Genomer::Plugin
#flags Genomer::Runtime
gemfile Genomer::Files
#genomer_project? Genomer::Runtime
#groffed_man_file Genomer::Runtime
#help Genomer::Runtime
#init Genomer::Runtime
#initialize Genomer::Plugin
#initialize Genomer::Runtime
#man Genomer::Runtime
#man_file Genomer::Runtime
#message Genomer::Runtime
#render_man Genomer::Runtime
#run Genomer::Plugin
#run_plugin Genomer::Runtime
#scaffold Genomer::Plugin
#scaffold_file Genomer::Plugin
scaffold_yml Genomer::Files
#sequence_file Genomer::Plugin
sequence_fna Genomer::Files