Method: Bio::SiRNA#initialize

Defined in:
lib/bio/util/sirna.rb

#initialize(seq, antisense_size = 21, max_gc_percent = 60.0, min_gc_percent = 40.0) ⇒ SiRNA

Input is a Bio::Sequence::NA object (the target sequence). Output is a list of Bio::SiRNA::Pair object.



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# File 'lib/bio/util/sirna.rb', line 64

def initialize(seq, antisense_size = 21, max_gc_percent = 60.0, min_gc_percent = 40.0)
  @seq = seq.rna!
  @pairs = Array.new
  @antisense_size = antisense_size
  @max_gc_percent = max_gc_percent
  @min_gc_percent = min_gc_percent
end