Method: Bio::KEGG::ORTHOLOGY#genes_as_hash

Defined in:
lib/bio/db/kegg/orthology.rb

#genes_as_hash ⇒ Object

Returns a Hash of the organism ID and an Array of entry IDs in GENES field.



98
99
100
101
102
103
104
105
106
107
108
 
# File 'lib/bio/db/kegg/orthology.rb', line 98

def genes_as_hash
  hash = {}
  genes.each do |line|
    name, *list = line.split(/\s+/)
    org = name.downcase.sub(/:/, '')
    genes = list.map {|x| x.sub(/\(.*\)/, '')}
    #names = list.map {|x| x.scan(/.*\((.*)\)/)}
    hash[org] = genes
  end
  return hash
end