Method: Bio::SQL::Location#sequence

Defined in:
lib/bio/io/biosql/location.rb

#sequence ⇒ Object 



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# File 'lib/bio/io/biosql/location.rb', line 19

def sequence
  seq=""
  unless self.seqfeature.bioentry.biosequence.seq.nil?
    seq=Bio::Sequence::NA.new(self.seqfeature.bioentry.biosequence.seq[start_pos-1..end_pos-1])
    seq.reverse_complement! if strand==-1
  end
  return seq        
end