Method: Exodb::Utils.guess_miriam
- Defined in:
- lib/exodb/utils.rb
.guess_miriam(str) ⇒ String
Guess the type of id
29 30 31 32 33 34 35 36 37 38 39 40 41 42 |
# File 'lib/exodb/utils.rb', line 29 def guess_miriam(str) case str when /\A((AC|AP|NC|NG|NM|NP|NR|NT|NW|XM|XP|XR|YP|ZP)_\d+|(NZ\_[A-Z]{4}\d+))(\.\d+)?\z/ return "urn:miriam:refseq:#{str}" when /\A((ENS[A-Z]*[FPTG]\d{11}(\.\d+)?)|(FB\w{2}\d{7})|(Y[A-Z]{2}\d{3}[a-zA-Z](\-[A-Z])?)|([A-Z_a-z0-9]+(\.)?(t)?(\d+)?([a-z])?))\z/ return "urn:miriam:ensembl:#{str}" when /\A((HGNC|hgnc):)?\d{1,5}\z/ return "urn:miriam:hgnc:#{str}" when /\ACCDS\d+\.\d+\z/ return "urn:miriam:ccds:#{str}" else return str end end |