Module: Cheripic

Defined in:

lib/cheripic.rb,
lib/cheripic/bfr.rb,
lib/cheripic/cmd.rb,
lib/cheripic/vcf.rb,
lib/cheripic/contig.rb,
lib/cheripic/pileup.rb,
lib/cheripic/options.rb,
lib/cheripic/regions.rb,
lib/cheripic/version.rb,
lib/cheripic/variants.rb,
lib/cheripic/implementer.rb,
lib/cheripic/contig_pileups.rb

Overview

Computing Homozygosity Enriched Regions In genomes to Prioritize Identification of Candidate variants (CHERIPIC) Cheripic module provides tools and pipeline to extract potential candidate mutations in around the region of the genome hosting the causative mutation behind the phenotype of interest.

Defined Under Namespace

Classes: Bfr, BfrError, CheripicArgError, CheripicError, CheripicIOError, Cmd, Contig, ContigError, ContigPileups, ContigPileupsError, Implementer, ImplementerError, Options, Pileup, PileupError, Regions, RegionsError, Variants, VariantsError, Vcf, VcfError

Constant Summary

VERSION =

Sets the semantic version number for this module. Version number will be used in help messages and for generating gem.

'1.2.6'